diff --git a/docs/API-Reference.md b/docs/API-Reference.md
index 70249b5..ac8b153 100644
--- a/docs/API-Reference.md
+++ b/docs/API-Reference.md
@@ -49,14 +49,14 @@ module.exports instead of exports.
 ## Module Loading
 
 When the ScriptCraft Java plugin is first installed, a new
-subdirectory is created in the craftbukkit directory. If your
+subdirectory is created in the craftbukkit/plugins directory. If your
 craftbukkit directory is called 'craftbukkit' then the new
 subdirectories will be ...
 
- * craftbukkit/scriptcraft/
- * craftbukkit/scriptcraft/plugins
- * craftbukkit/scriptcraft/modules
- * craftbukkit/scriptcraft/lib
+ * craftbukkit/plugins/scriptcraft/
+ * craftbukkit/plugins/scriptcraft/plugins
+ * craftbukkit/plugins/scriptcraft/modules
+ * craftbukkit/plugins/scriptcraft/lib
 
 ... The `plugins`, `modules` and `lib` directories each serve a different purpose.
 
@@ -317,7 +317,7 @@ See chat/color.js for an example of a simple plugin - one which lets
 players choose a default chat color. See also [Anatomy of a
 ScriptCraft Plugin][anatomy].
  
-[anatomy]: http://walterhiggins.net/blog/ScriptCraft-1-Month-later
+[anatomy]: ./Anatomy-of-a-Plugin.md
 
 ### command() function
 
@@ -330,8 +330,18 @@ plugin author) safely expose javascript functions for use by players.
 
 #### Parameters
  
- * commandName : The name to give your command - the command will be invoked like this by players `/jsp commandName`
- * commandFunction: The javascript function which will be invoked when the command is invoked by a player.
+ * commandName : The name to give your command - the command will 
+   be invoked like this by players `/jsp commandName`
+ * commandFunction: The javascript function which will be invoked when
+   the command is invoked by a player. The callback function in turn
+   takes 2 parameters...
+
+   * params : An Array of type String - the list of parameters 
+     passed to the command.
+   * sender : The [CommandSender][bukcs] object that invoked the
+     command (this is usually a Player object but can be a Block
+     ([BlockCommandSender][bukbcs]).
+
  * options (Array - optional) : An array of command options/parameters
    which the player can supply (It's useful to supply an array so that
    Tab-Completion works for the `/jsp ` commands.
@@ -393,7 +403,9 @@ A scriptcraft implementation of clearInterval().
 
 ### refresh() function
 
-The refresh() function will ...
+The refresh() function can be used to only reload the ScriptCraft
+plugin (it's like the `reload` command except it only reloads
+ScriptCraft). The refresh() function will ...
 
 1. Disable the ScriptCraft plugin.
 2. Unload all event listeners associated with the ScriptCraft plugin.
@@ -411,6 +423,10 @@ parameter. The callback will be called when the ScriptCraft plugin is
 unloaded (usually as a result of a a `reload` command or server
 shutdown).
 
+This function provides a way for ScriptCraft modules to do any
+required cleanup/housekeeping just prior to the ScriptCraft Plugin
+unloading.
+
 ## require - Node.js-style module loading in ScriptCraft
 
 Node.js is a server-side javascript environment with an excellent
diff --git a/docs/YoungPersonsGuideToProgrammingMinecraft.md b/docs/YoungPersonsGuideToProgrammingMinecraft.md
index 6f547be..88a296f 100644
--- a/docs/YoungPersonsGuideToProgrammingMinecraft.md
+++ b/docs/YoungPersonsGuideToProgrammingMinecraft.md
@@ -480,11 +480,11 @@ Once you've installed Notepad++, Launch it, create a new file and type the follo
     }
 
 ... then save the file in a new directory
-`craftbukkit/scriptcraft/plugins/{your_name}` (replace {your_name} with your
-own name) and call the file `greet.js` (be sure to change the file-type
-option to '*.* All Files' when saving or NotePad++ will add a '.txt'
-extension to the filename. Now switch back to the Minecraft game and
-type...
+`craftbukkit/plugins/scriptcraft/plugins/{your_name}` (replace
+{your_name} with your own name) and call the file `greet.js` (be sure
+to change the file-type option to '*.* All Files' when saving or
+NotePad++ will add a '.txt' extension to the filename. Now switch back
+to the Minecraft game and type...
 
     /js refresh()
 
@@ -501,10 +501,10 @@ loaded. Try it out by typing this command...
 minecraft username. Congratulations - You've just written your very
 first Minecraft Mod! With ScriptCraft installed, writing Minecraft
 Mods is as simple as writing a new javascript function and saving it
-in a file in the craftbukkit/scriptcraft/plugins directory. This
-function will now be avaible every time you launch minecraft. This is
-a deliberately trivial minecraft mod but the principles are the same
-when creating more complex mods.
+in a file in the craftbukkit/plugins/scriptcraft/plugins
+directory. This function will now be avaible every time you launch
+minecraft. This is a deliberately trivial minecraft mod but the
+principles are the same when creating more complex mods.
 
 The `exports` variable is a special variable you can use in your mod
 to provide functions, objects and variables for others to use. If you
diff --git a/src/main/javascript/lib/command.js b/src/main/javascript/lib/command.js
index 67b6ace..411aa17 100644
--- a/src/main/javascript/lib/command.js
+++ b/src/main/javascript/lib/command.js
@@ -1,3 +1,4 @@
+'use strict';
 /* 
    command management - allow for non-ops to execute approved javascript code.
 */
diff --git a/src/main/javascript/lib/console.js b/src/main/javascript/lib/console.js
index 122af34..91c437b 100644
--- a/src/main/javascript/lib/console.js
+++ b/src/main/javascript/lib/console.js
@@ -1,3 +1,4 @@
+'use strict';
 /*************************************************************************
 ## console global variable
 
diff --git a/src/main/javascript/lib/events.js b/src/main/javascript/lib/events.js
index fdb4357..4945955 100644
--- a/src/main/javascript/lib/events.js
+++ b/src/main/javascript/lib/events.js
@@ -1,3 +1,4 @@
+'use strict';
 /************************************************************************
 ## events Module
 
diff --git a/src/main/javascript/lib/plugin.js b/src/main/javascript/lib/plugin.js
index c43503c..87d7978 100644
--- a/src/main/javascript/lib/plugin.js
+++ b/src/main/javascript/lib/plugin.js
@@ -1,3 +1,4 @@
+'use strict';
 var console = require('./console');
 var File = java.io.File;
 var FileWriter = java.io.FileWriter;
diff --git a/src/main/javascript/lib/require.js b/src/main/javascript/lib/require.js
index 1cd1677..5bce81e 100644
--- a/src/main/javascript/lib/require.js
+++ b/src/main/javascript/lib/require.js
@@ -54,7 +54,7 @@ module specification, the '.js' suffix is optional.
 [cjsmodules]: http://wiki.commonjs.org/wiki/Modules/1.1.1.
 
 ***/
-( function (logger, evaluator, verbose, rootDir, modulePaths) {
+(function (logger, evaluator, verbose, rootDir, modulePaths) {
 
     if (verbose){
         logger.info("Setting up 'require' module system. Root Directory: " + rootDir);
@@ -260,3 +260,4 @@ When resolving module names to file paths, ScriptCraft uses the following rules.
     };
     return _requireClosure(new java.io.File(rootDir));
 })
+
diff --git a/src/main/javascript/lib/scriptcraft.js b/src/main/javascript/lib/scriptcraft.js
index ec34e01..5cce36d 100644
--- a/src/main/javascript/lib/scriptcraft.js
+++ b/src/main/javascript/lib/scriptcraft.js
@@ -1,3 +1,4 @@
+'use strict';
 /************************************************************************
 # ScriptCraft API Reference
 
@@ -50,14 +51,14 @@ module.exports instead of exports.
 ## Module Loading
 
 When the ScriptCraft Java plugin is first installed, a new
-subdirectory is created in the craftbukkit directory. If your
+subdirectory is created in the craftbukkit/plugins directory. If your
 craftbukkit directory is called 'craftbukkit' then the new
 subdirectories will be ...
 
- * craftbukkit/scriptcraft/
- * craftbukkit/scriptcraft/plugins
- * craftbukkit/scriptcraft/modules
- * craftbukkit/scriptcraft/lib
+ * craftbukkit/plugins/scriptcraft/
+ * craftbukkit/plugins/scriptcraft/plugins
+ * craftbukkit/plugins/scriptcraft/modules
+ * craftbukkit/plugins/scriptcraft/lib
 
 ... The `plugins`, `modules` and `lib` directories each serve a different purpose.
 
@@ -318,7 +319,7 @@ See chat/color.js for an example of a simple plugin - one which lets
 players choose a default chat color. See also [Anatomy of a
 ScriptCraft Plugin][anatomy].
  
-[anatomy]: http://walterhiggins.net/blog/ScriptCraft-1-Month-later
+[anatomy]: ./Anatomy-of-a-Plugin.md
 
 ### command() function
 
@@ -331,8 +332,18 @@ plugin author) safely expose javascript functions for use by players.
 
 #### Parameters
  
- * commandName : The name to give your command - the command will be invoked like this by players `/jsp commandName`
- * commandFunction: The javascript function which will be invoked when the command is invoked by a player.
+ * commandName : The name to give your command - the command will 
+   be invoked like this by players `/jsp commandName`
+ * commandFunction: The javascript function which will be invoked when
+   the command is invoked by a player. The callback function in turn
+   takes 2 parameters...
+
+   * params : An Array of type String - the list of parameters 
+     passed to the command.
+   * sender : The [CommandSender][bukcs] object that invoked the
+     command (this is usually a Player object but can be a Block
+     ([BlockCommandSender][bukbcs]).
+
  * options (Array - optional) : An array of command options/parameters
    which the player can supply (It's useful to supply an array so that
    Tab-Completion works for the `/jsp ` commands.
@@ -394,7 +405,9 @@ A scriptcraft implementation of clearInterval().
 
 ### refresh() function
 
-The refresh() function will ...
+The refresh() function can be used to only reload the ScriptCraft
+plugin (it's like the `reload` command except it only reloads
+ScriptCraft). The refresh() function will ...
 
 1. Disable the ScriptCraft plugin.
 2. Unload all event listeners associated with the ScriptCraft plugin.
@@ -412,6 +425,10 @@ parameter. The callback will be called when the ScriptCraft plugin is
 unloaded (usually as a result of a a `reload` command or server
 shutdown).
 
+This function provides a way for ScriptCraft modules to do any
+required cleanup/housekeeping just prior to the ScriptCraft Plugin
+unloading.
+
 ***/
 
 /*
@@ -437,8 +454,8 @@ function __onEnable (__engine, __plugin, __script)
         return "" + file.getCanonicalPath().replaceAll("\\\\","/"); 
     };
     
-    var parentFileObj = __script.parentFile;
-    var jsPluginsRootDir = parentFileObj.parentFile;
+    var libDir = __script.parentFile; // lib (assumes scriptcraft.js is in craftbukkit/plugins/scriptcraft/lib directory
+    var jsPluginsRootDir = libDir.parentFile; // scriptcraft
     var jsPluginsRootDirName = _canonize(jsPluginsRootDir);
 
     var _loaded = {};
@@ -466,11 +483,13 @@ function __onEnable (__engine, __plugin, __script)
             var reader = new FileReader(file);
             var br = new BufferedReader(reader);
             var code = "";
+            var wrappedCode;
             try{
                 while ((r = br.readLine()) !== null) 
                     code += r + "\n";
-                
-                result = __engine.eval("(" + code + ")");
+
+                wrappedCode = "(" + code + ")";
+                result = __engine.eval(wrappedCode);
                 // issue #103 avoid side-effects of || operator on Mac Rhino
                 _loaded[canonizedFilename] = result ;
                 if (!_loaded[canonizedFilename])
@@ -619,4 +638,23 @@ function __onEnable (__engine, __plugin, __script)
         }
         return result;
     };
+    /*
+      wph 20140102 - warn if legacy 'craftbukkit/js-plugins' or 'craftbukkit/scriptcraft' directories are present
+     */
+    var cbPluginsDir = jsPluginsRootDir.parentFile;
+    var cbDir = new File(cbPluginsDir.canonicalPath).parentFile;
+    var legacyDirs = [
+        new File(cbDir, 'js-plugins'), 
+        new File(cbDir, 'scriptcraft')
+    ];
+    var legacyExists = false;
+    for (var i = 0; i < legacyDirs.length; i++){
+        if (legacyDirs[i].exists() && legacyDirs[i].isDirectory()){
+            legacyExists = true;
+            console.warn('Legacy ScriptCraft directory ' + legacyDirs[i].canonicalPath + ' was found. This directory is no longer used.');
+        }
+    }
+    if (legacyExists){
+        console.info('Please note that the working directory for ' + __plugin + ' is ' + jsPluginsRootDir.canonicalPath);
+    }
 }
diff --git a/src/main/javascript/lib/tabcomplete-jsp.js b/src/main/javascript/lib/tabcomplete-jsp.js
index 8a0c129..e2106ed 100644
--- a/src/main/javascript/lib/tabcomplete-jsp.js
+++ b/src/main/javascript/lib/tabcomplete-jsp.js
@@ -1,3 +1,4 @@
+'use strict';
 var _commands = require('command').commands;
 /*
   Tab completion for the /jsp commmand
diff --git a/src/main/javascript/lib/tabcomplete.js b/src/main/javascript/lib/tabcomplete.js
index 885f6d0..9b85d3d 100644
--- a/src/main/javascript/lib/tabcomplete.js
+++ b/src/main/javascript/lib/tabcomplete.js
@@ -1,3 +1,4 @@
+'use strict';
 var tabCompleteJSP = require('tabcomplete-jsp');
 /*
   Tab Completion of the /js and /jsp commands
diff --git a/src/main/javascript/modules/utils/string-exts.js b/src/main/javascript/modules/utils/string-exts.js
index 8be2180..bb33e23 100644
--- a/src/main/javascript/modules/utils/string-exts.js
+++ b/src/main/javascript/modules/utils/string-exts.js
@@ -1,3 +1,4 @@
+'use strict';
 /************************************************************************
 String class extensions
 -----------------------
@@ -61,7 +62,6 @@ var formattingCodes = {
     italic: c.ITALIC,
     lightpurple: c.LIGHT_PURPLE,
     indigo: c.BLUE,
-    green: c.GREEN,
     red: c.RED,
     pink: c.LIGHT_PURPLE,
     yellow: c.YELLOW,
diff --git a/src/main/javascript/modules/utils/utils.js b/src/main/javascript/modules/utils/utils.js
index 1e45a3b..9ed6730 100644
--- a/src/main/javascript/modules/utils/utils.js
+++ b/src/main/javascript/modules/utils/utils.js
@@ -1,3 +1,4 @@
+'use strict';
 /************************************************************************
 ## Utilities Module